Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-3399-8

https://doi.org/10.1186/s12859-020-3399-8

iSeqQC: a tool for expression-based quality control in RNA sequencing

Cited by: 15
Author(s): Gaurav Kumar, Adam Ertel, George J. Feldman, Joan Kupper, Paolo Fortina
Published: almost 5 years ago

Software Mentions 6

bioconductor: DEGreport
Report of DEG analysis
Papers that mentioned: 6
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: EDASeq
Exploratory Data Analysis and Normalization for RNA-Seq
Papers that mentioned: 61
bioconductor: NOISeq
Exploratory analysis and differential expression for RNA-seq data
Papers that mentioned: 321
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366