Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-3360-x

https://doi.org/10.1186/s12859-020-3360-x

ShinyOmics: collaborative exploration of omics-data

Cited by: 11
Author(s): Defne Surujon, Tim van Opijnen
Published: almost 5 years ago

Software Mentions 11

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: mixOmics

Omics Data Integration Project
Papers that mentioned: 375

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: heatmaply

Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Papers that mentioned: 45

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: RColorBrewer

ColorBrewer Palettes
Papers that mentioned: 490

cran: shiny

Web Application Framework for R
Papers that mentioned: 127

cran: shinyHeatmaply

Deploy 'heatmaply' using 'shiny'
Papers that mentioned: 3

cran: visNetwork

Network Visualization using 'vis.js' Library
Papers that mentioned: 49

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: shiny

A web development framework for Python.
Papers that mentioned: 127