Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-03927-2

https://doi.org/10.1186/s12859-020-03927-2

WACS: improving ChIP-seq peak calling by optimally weighting controls

Cited by: 2
Author(s): Aseel Awdeh, Marcel Turcotte, Theodore J. Perkins
Published: almost 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
cran: WACS
Multivariate Weather-State Approach Conditionally Skew-Normal Generator
Papers that mentioned: 1
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071