Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12859-020-03831-9
https://doi.org/10.1186/s12859-020-03831-9
Tissue-associated microbial detection in cancer using human sequencing data
Cited by: 6
Author(s): Rebecca M. Rodriguez, Vedbar S. Khadka, Mark Menor, Brenda Y. Hernandez, Youping Deng
Published: almost 4 years ago
Software Mentions 3
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomesPapers that mentioned: 144