Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-03729-6

https://doi.org/10.1186/s12859-020-03729-6

Theoretical characterisation of strand cross-correlation in ChIP-seq

Cited by: 2
Author(s): Hayato Anzawa, Hitoshi Yamagata, Kengo Kinoshita
Published: about 4 years ago

Software Mentions 4

bioconductor: GEM

GEM: fast association study for the interplay of Gene, Environment and Methylation
Papers that mentioned: 317

cran: SSP

Simulated Sampling Procedure for Community Ecology
Papers that mentioned: 81

pypi: MACS2

Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203

pypi: PyMaSC

Python implementation to calc mappability-sensitive cross-correlation for fragment length estimation and quality control for ChIP-Seq.
Papers that mentioned: 1