Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-019-2968-1

https://doi.org/10.1186/s12859-019-2968-1

Visualization methods for differential expression analysis

Cited by: 6
Author(s): Lindsay Rutter, Adrienne N. Moran Lauter, Michelle A. Graham, Dianne Cook
Published: about 5 years ago

Software Mentions 11

bioconductor: bigPint
Big multivariate data plotted interactively
Papers that mentioned: 3
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: htmlwidgets
HTML Widgets for R
Papers that mentioned: 14
cran: pkgdown
Make Static HTML Documentation for a Package
Papers that mentioned: 5
cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
cran: shiny
Web Application Framework for R
Papers that mentioned: 127
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163
pypi: shiny
A web development framework for Python.
Papers that mentioned: 127