Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-019-2961-8

https://doi.org/10.1186/s12859-019-2961-8

FastqCleaner: an interactive Bioconductor application for quality-control, filtering and trimming of FASTQ files

Cited by: 11
Author(s): Leandro Gabriel Roser, Fernán Agüero, Daniel O. Sánchez
Published: over 5 years ago

Software Mentions 6

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
bioconductor: FastqCleaner
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
Papers that mentioned: 1
bioconductor: IRanges
Foundation of integer range manipulation in Bioconductor
Papers that mentioned: 62
bioconductor: ShortRead
FASTQ input and manipulation
Papers that mentioned: 119
cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562