Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-019-2870-x

https://doi.org/10.1186/s12859-019-2870-x

anamiR: integrated analysis of MicroRNA and gene expression profiling

Cited by: 12
Author(s): Ti-Tai Wang, Chien‐Yueh Lee, Liang‐Chuan Lai, Mong‐Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
Published: over 5 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: gage
Generally Applicable Gene-set Enrichment for Pathway Analysis
Papers that mentioned: 45
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: SummarizedExperiment
SummarizedExperiment container
Papers that mentioned: 52
cran: RMySQL
Database Interface and 'MySQL' Driver for R
Papers that mentioned: 24