Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-019-2840-3

https://doi.org/10.1186/s12859-019-2840-3

m6Acomet: large-scale functional prediction of individual m6A RNA methylation sites from an RNA co-methylation network

Cited by: 30
Author(s): Xiangyu Wu, Zhen Wei, Kunqi Chen, Qing Zhang, Jionglong Su, Hui Liu, Lin Zhang, Jia Meng
Published: over 5 years ago

Software Mentions 6

bioconductor: AnnotationDbi
Manipulation of SQLite-based annotations in Bioconductor
Papers that mentioned: 73
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: multtest
Resampling-based multiple hypothesis testing
Papers that mentioned: 158
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555