Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-018-2370-4

https://doi.org/10.1186/s12859-018-2370-4

GPrank: an R package for detecting dynamic elements from genome-wide time series

Cited by: 7
Author(s): Hande Topa, Antti Honkela
Published: about 6 years ago

Software Mentions 7

bioconductor: BitSeq
Papers that mentioned: 28
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: maSigPro
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
Papers that mentioned: 119
cran: GPrank
Papers that mentioned: 2
cran: gptk
Gaussian Processes Tool-Kit
Papers that mentioned: 2
pypi: tigreBrowser
Gene expression model browser for results from tigre R package (http://www.bioconductor.org/packages/release/bioc/html/tigre.html)
Papers that mentioned: 1