Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-017-1780-z

https://doi.org/10.1186/s12859-017-1780-z

Local sequence and sequencing depth dependent accuracy of RNA-seq reads

Cited by: 9
Author(s): Guoshuai Cai, Shoudan Liang, Xiaofeng Zheng, Feifei Xiao
Published: over 7 years ago

Software Mentions 5

bioconductor: baySeq
Empirical Bayesian analysis of patterns of differential expression in count data
Papers that mentioned: 139
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759