Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-016-1180-9

https://doi.org/10.1186/s12859-016-1180-9

Statistical inference for time course RNA-Seq data using a negative binomial mixed-effect model

Cited by: 21
Author(s): Xiaoxiao Sun, David Dalpiaz, Di Wu, Jun S. Liu, Wenxuan Zhong, Ping Ma
Published: about 8 years ago

Software Mentions 7

bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: maSigPro
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
Papers that mentioned: 119
cran: GSA
Gene Set Analysis
Papers that mentioned: 285
cran: timeSeq
Detecting Differentially Expressed Genes in Time Course RNA-Seq Data
Papers that mentioned: 1
pypi: db
Databases for Humans
Papers that mentioned: 108
pypi: GSA
Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSA
Papers that mentioned: 285