Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-015-0873-9

https://doi.org/10.1186/s12859-015-0873-9

TRAPLINE: a standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation

Cited by: 34
Author(s): Markus Wolfien, Christian Rimmbach, Ulf Schmitz, Julia Jeannine Jung, Stefan Krebs, Gustav Steinhoff, Róbert Dávid, Olaf Wolkenhauer
Published: almost 9 years ago

Software Mentions 3

bioconductor: EBSeq
An R package for gene and isoform differential expression analysis of RNA-seq data
Papers that mentioned: 261
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366