Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-015-0788-5

https://doi.org/10.1186/s12859-015-0788-5

Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities

Cited by: 125
Author(s): Michael A. Peabody, Thea Van Rossum, Raymond Lo, Fiona S. L. Brinkman
Published: about 9 years ago

Software Mentions 1

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306