Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12284-016-0098-1

https://doi.org/10.1186/s12284-016-0098-1

Comparative Leaf and Root Transcriptomic Analysis of two Rice Japonica Cultivars Reveals Major Differences in the Root Early Response to Osmotic Stress

Cited by: 32
Author(s): Elena Baldoni, Paolo Bagnaresi, Franca Locatelli, Monica Mattana, Annamaria Genga
Published: over 8 years ago

Software Mentions 6

bioconductor: goseq
Gene Ontology analyser for RNA-seq and other length biased data
Papers that mentioned: 132
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: Mercator
Clustering and Visualizing Distance Matrices
Papers that mentioned: 347
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017