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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/gb-2011-12-8-r83

https://doi.org/10.1186/gb-2011-12-8-r83

Cistrome: an integrative platform for transcriptional regulation studies

Cited by: 583
Author(s): Tao Liu, Jorge Ortíz, Len Taing, Clifford A. Meyer, Bernett Lee, Yong Zhang, Hyunjin Shin, Suei Nee Wong, Jian Ma, Ying Lei, Utz Johann Pape, Michael Poidinger, Yiwen Chen, Kevin Yeung, Myles Brown, Yaron Turpaz, X Shirley Liu
Published: over 14 years ago

Software Mentions 6

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: GOstats
Tools for manipulating GO and microarrays
Papers that mentioned: 368
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
Very Likely Science (75)
cran: MAT
Multidimensional Adaptive Testing
Papers that mentioned: 216
Very Likely Science (83)
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
Very Likely Science (75)