Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2164-15-71

https://doi.org/10.1186/1471-2164-15-71

Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian

Cited by: 37
Author(s): Derek Stefanik, Tristan Lubinski, Brian R. Granger, Allyson L. Byrd, Adam M. Reitzel, Lukas DeFilippo, Allison Lorenc, John R. Finnerty
Published: almost 11 years ago

Software Mentions 5

bioconductor: iPath
iPath pipeline for detecting perturbed pathways at individual level
Papers that mentioned: 95
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: biopython
Freely available tools for computational molecular biology.
Papers that mentioned: 114
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: pgdb
PostgreSQL wrapper
Papers that mentioned: 1