Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-15-S9-S6

https://doi.org/10.1186/1471-2105-15-S9-S6

BADGE: A novel Bayesian model for accurate abundance quantification and differential analysis of RNA-Seq data

Cited by: 10
Author(s): Jin Gu, Wang Xiao, Leena Halakivi-Clarke, Robert Clarke, Jianhua Xuan
Published: about 10 years ago

Software Mentions 5

bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
bioconductor: EBSeq
An R package for gene and isoform differential expression analysis of RNA-seq data
Papers that mentioned: 261
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: NOISeq
Exploratory analysis and differential expression for RNA-seq data
Papers that mentioned: 321
cran: SLIDE
Single Cell Linkage by Distance Estimation is SLIDE
Papers that mentioned: 50