Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-13-176

https://doi.org/10.1186/1471-2105-13-176

The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding

Cited by: 9
Author(s): Karl Kornacker, Morten Rye, Tony Håndstad, Finn Drabløs
Published: over 12 years ago

Software Mentions 4

bioconductor: IRanges

Foundation of integer range manipulation in Bioconductor
Papers that mentioned: 62

bioconductor: PICS

Probabilistic inference of ChIP-seq
Papers that mentioned: 73

pypi: MACS

Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233

pypi: STAMP

A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190