Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-12-267

https://doi.org/10.1186/1471-2105-12-267

SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data

Cited by: 39
Author(s): Xutao Deng
Published: over 13 years ago

Software Mentions 7

bioconductor: DEGseq
Identify Differentially Expressed Genes from RNA-seq data
Papers that mentioned: 697
bioconductor: DNAcopy
DNA Copy Number Data Analysis
Papers that mentioned: 154
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989