Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-10-325

https://doi.org/10.1186/1471-2105-10-325

Riboswitch Detection Using Profile Hidden Markov Models

Cited by: 33
Author(s): Payal Singh, Pradipta Bandyopadhyay, Sudha Bhattacharya, Annangarachari Krishnamachari, Supratim Sengupta
Published: about 15 years ago

Software Mentions 7

bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: finder
Command line interface for searching a given pattern in the given directory/file paths
Papers that mentioned: 236
pypi: infernal
Core library for the Infernal eSports Analytics Infernal library.
Papers that mentioned: 54
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668