Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1172/jci.insight.147703

https://doi.org/10.1172/jci.insight.147703

Integration of spatial and single-cell transcriptomics localizes epithelial cell–immune cross-talk in kidney injury

Cited by: 68
Author(s): Ricardo Melo Ferreira, Angela R Sabo, Seth Winfree, Kimberly S. Collins, Danielle Janosevic, Connor J. Gulbronson, Ying‐Hua Cheng, Lauren Casbon, Daria Barwinska, Michael J. Ferkowicz, Xiaoling Xuei, Chi Zhang, Kenneth W. Dunn, Katherine J. Kelly, Timothy A. Sutton, Takashi Hato, Pierre C. Dagher, Tarek M. El‐Achkar, Michael T. Eadon
Published: about 3 years ago

Software Mentions 4

bioconductor: CODEX
A Normalization and Copy Number Variation Detection Method for Whole Exome Sequencing
Papers that mentioned: 72
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759