Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1172/jci.insight.146351

https://doi.org/10.1172/jci.insight.146351

Chromosome 8 gain is associated with high-grade transformation in MPNST

Cited by: 20
Author(s): Carina Dehner, Chang In Moon, Zhang Xi-yuan, Zhiyong Zhou, Chris Miller, Hui Xu, Xiaodan Wan, Kuangying Yang, R. Jay Mashl, Sara J.C. Gosline, Yuxi Wang, Xiaochun Zhang, Abigail Godec, Paul A. Jones, Sonika Dahiya, Himanshi Bhatia, Tina Primeau, Shunqiang Li, Kai Pollard, Fausto J. Rodríguez, Ding Li, Christine A. Pratilas, Jack F. Shern, Angela C. Hirbe
Published: over 3 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GenVisR
Genomic Visualizations in R
Papers that mentioned: 54
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: CNVkit
Copy number variation toolkit for high-throughput sequencing.
Papers that mentioned: 161