Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1172/jci.insight.141024

https://doi.org/10.1172/jci.insight.141024

Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration

Cited by: 34
Author(s): Tianyi Chen, Seh–Hoon Oh, Simon Gregory, Xiling Shen, Anna Mae Diehl
Published: almost 4 years ago

Software Mentions 4

bioconductor: AUCell
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
Papers that mentioned: 45
bioconductor: chromVAR
Chromatin Variation Across Regions
Papers that mentioned: 46
bioconductor: GENIE3
GEne Network Inference with Ensemble of trees
Papers that mentioned: 172
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203