Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1172/jci.insight.139932

https://doi.org/10.1172/jci.insight.139932

Immunopathogenesis of hidradenitis suppurativa and response to anti–TNF-α therapy

Cited by: 61
Author(s): Margaret M. Lowe, Haley B. Naik, Sean Clancy, Mariela Pauli, Kathleen M. Smith, Yingtao Bi, Robert W. Dunstan, Johann E. Gudjonsson, Maia Paul, Hobart W. Harris, Esther Kim, Uk Sok Shin, Richard Ahn, Wilson Liao, Scott L. Hansen, Michael D. Rosenblum
Published: about 4 years ago

Software Mentions 4

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893

pypi: kallisto

The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307