Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1172/jci.insight.138443

https://doi.org/10.1172/jci.insight.138443

Epigenetic regulation of the PGE2 pathway modulates macrophage phenotype in normal and pathologic wound repair

Cited by: 31
Author(s): Frank M. Davis, Lam C. Tsoi, Rachael Wasikowski, Aaron D. denDekker, Amrita Joshi, Carol A. Wilke, Hongping Deng, Sonya Wolf, Andrea Obi, Steven K. Huang, Allison C. Billi, Scott T. Robinson, Jay H Lipinski, William J. Melvin, Christopher O. Audu, Stephan Weidinger, Steven L. Kunkel, Andrew M. Smith, Jóhann E. Guðjónsson, Bethany B. Moore, Katherine A. Gallagher
Published: over 4 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071