Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1155/2021/5633514

https://doi.org/10.1155/2021/5633514

Roles of the Immune/Methylation/Autophagy Landscape on Single-Cell Genotypes and Stroke Risk in Breast Cancer Microenvironment

Cited by: 22
Author(s): Junyi Wu, Jun Qin, Lei Li, Kun-Dong Zhang, Yisheng Chen, Yang Li, Tao Jin, Jianrong Xu
Published: over 3 years ago

Software Mentions 9

bioconductor: ConsensusClusterPlus
ConsensusClusterPlus
Papers that mentioned: 313
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
cran: GOplot
Visualization of Functional Analysis Data
Papers that mentioned: 269
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: CellPhoneDB
Inferring cell-cell communication.
Papers that mentioned: 89
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555