Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1136/jitc-2020-000778

https://doi.org/10.1136/jitc-2020-000778

M1<sup>hot</sup>tumor-associated macrophages boost tissue-resident memory T cells infiltration and survival in human lung cancer

Cited by: 75
Author(s): Eva M. Garrido-Martín, Toby Mellows, James Clarke, Anusha-Preethi Ganesan, Oliver Wood, Angelica Cazaly, Grégory Seumois, Serena Chee, Aiman Alzetani, Emma V. King, Catherine C. Hedrick, Gareth J. Thomas, Peter S. Friedmann, Christian Ottensmeier, Pandurangan Vijayanand, Tilman Sánchez-Elsner
Published: over 4 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017