Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1136/jitc-2020-000588

https://doi.org/10.1136/jitc-2020-000588

Cited by: 30
Author(s): Sjoerd Schetters, Elizabeth Rodríguez, Laura Kruijssen, Matheus H.W. Crommentuijn, Louis Boon, Jan Van den Bossche, Joke M. M. den Haan, Yvette van Kooyk
Published: almost 4 years ago

Software Mentions 8

bioconductor: flowCore
flowCore: Basic structures for flow cytometry data
Papers that mentioned: 109
bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: psych
Procedures for Psychological, Psychometric, and Personality Research
Papers that mentioned: 1,085
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: of
The Optimal Framework is the fastest path to building any modern multi-user system
Papers that mentioned: 1,025