Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.01196-20

https://doi.org/10.1128/mSystems.01196-20

Freshwater <i>Chlorobia</i> Exhibit Metabolic Specialization among Cosmopolitan and Endemic Populations

Cited by: 6
Author(s): Sarahi L. Garcia, Maliheh Mehrshad, Moritz Buck, Jackson M. Tsuji, Josh D. Neufeld, Katherine D. McMahon, Stefan Bertilsson, Chris Greening, Sari Peura
Published: over 3 years ago

Software Mentions 5

bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
pypi: mOTUlizer
making OTUs from genomes, and stats on them. and even core-genomes
Papers that mentioned: 1
pypi: sourmash
tools for comparing biological sequences with k-mer sketches
Papers that mentioned: 10