Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.01045-20

https://doi.org/10.1128/mSystems.01045-20

Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity

Cited by: 38
Author(s): Nicholas D. Youngblut, Jacobo de la Cuesta-Zuluaga, Georg H. Reischer, Chris Walzer
Published: almost 4 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
Papers that mentioned: 144
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213