Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00852-20

https://doi.org/10.1128/mSystems.00852-20

Virulence of the Pathogen Porphyromonas gingivalis Is Controlled by the CRISPR-Cas Protein Cas3

Cited by: 16
Author(s): José O. Solbiati, Ana E. Duran-Pinedo, Fernanda Godoy Rocha, Frank C. Gibson, Jorge Frias-Lopez
Published: about 4 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: mixOmics
Omics Data Integration Project
Papers that mentioned: 375
cran: agricolae
Statistical Procedures for Agricultural Research
Papers that mentioned: 260
cran: emmeans
Estimated Marginal Means, aka Least-Squares Means
Papers that mentioned: 1,009
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903