Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00195-17

https://doi.org/10.1128/mSystems.00195-17

Developing a <i>Bacteroides</i> System for Function-Based Screening of DNA from the Human Gut Microbiome

Cited by: 8
Author(s): Kathy N. Lam, Eric C. Martens, Trevor C. Charles
Published: over 6 years ago

Software Mentions 5

bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: genoPlotR
Plot Publication-Grade Gene and Genome Maps
Papers that mentioned: 96
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918