Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1128/mSystems.00061-19
https://doi.org/10.1128/mSystems.00061-19
Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations
Cited by: 36
Author(s): Taniya Roy Chowdhury, Joon‐Yong Lee, Eric Bottos, Colin Brislawn, Richard Allen White, Lisa Bramer, Joseph Brown, Jeremy Zucker, Young Mo Kim, Ari Jumpponen, Charles W. Rice, Sarah Fansler, Thomas O. Metz, Lee Ann McCue, Stephen Callister, Hyun‐Seob Song, Janet K. Jansson
Published: over 5 years ago
Software Mentions 3
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
pypi: MetaPathways
MetaPathways is a modular pipeline to build PGDBs from Metagenomic sequences.Papers that mentioned: 25
pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.Papers that mentioned: 827