Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00020-16

https://doi.org/10.1128/mSystems.00020-16

MetaPalette: a <i>k</i> -mer Painting Approach for Metagenomic Taxonomic Profiling and Quantification of Novel Strain Variation

Cited by: 56
Author(s): David Koslicki, Daniel Falush
Published: over 8 years ago

Software Mentions 2

pypi: bzip2
Papers that mentioned: 58
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306