Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.02699-19

https://doi.org/10.1128/mBio.02699-19

Cited by: 24
Author(s): Vincent Tu, Tadakimi Tomita, Tatsuki Sugi, Joshua Mayoral, Bing Han, Rama R. Yakubu, Tere Williams, Aline Luciano Horta, Yanfen Ma, Louis M. Weiss
Published: about 4 years ago

Software Mentions 11

bioconductor: ggtree

an R package for visualization of tree and annotation data
Papers that mentioned: 474

bioconductor: msa

Multiple Sequence Alignment
Papers that mentioned: 50

cran: ape

Analyses of Phylogenetics and Evolution
Papers that mentioned: 918

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: VennDiagram

Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626

pypi: ape

A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918

pypi: BioID

A python package for autonomously identifying Bioinformatic file formats.
Papers that mentioned: 208

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: msa

Maven settings administrator
Papers that mentioned: 50

pypi: Scaffold

Simple project scaffolding for Python
Papers that mentioned: 1,866