Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.01557-20

https://doi.org/10.1128/mBio.01557-20

Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax)

Cited by: 55
Author(s): Morten Simonsen Dueholm, Kasper Skytte Andersen, Simon Jon McIlroy, Jannie Munk Kristensen, Erika Yashiro, Søren Michael Karst, Mads Albertsen, Per Halkjær Nielsen
Published: about 4 years ago

Software Mentions 6

cran: data.table
Extension of 'data.frame'
Papers that mentioned: 33
cran: doParallel
Foreach Parallel Adaptor for the 'parallel' Package
Papers that mentioned: 90
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: stringr
Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321