Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.01442-21

https://doi.org/10.1128/mBio.01442-21

Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship

Cited by: 9
Author(s): Candice L. Swift, Katherine Louie, Benjamin P. Bowen, Casey A. Hooker, Kevin Solomon, Vasanth Singan, Chris Daum, Christa Pennacchio, Kerrie Barry, V. Shutthanandan, James E. Evans, Igor V. Grigoriev, Trent Northen, Michelle O’Malley
Published: over 3 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: chemometrics
Multivariate Statistical Analysis in Chemometrics
Papers that mentioned: 12
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
pypi: builder
A framework for building batch processing pipelines
Papers that mentioned: 49
pypi: chemometrics
package for chemometric data analysis
Papers that mentioned: 12