Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.00971-19

https://doi.org/10.1128/mBio.00971-19

Evolution of Superinfection Immunity in Cluster A Mycobacteriophages

Cited by: 48
Author(s): Travis N. Mavrich, Graham F. Hatfull
Published: over 5 years ago

Software Mentions 6

bioconductor: Biostrings

Efficient manipulation of biological strings
Papers that mentioned: 220

bioconductor: TFBSTools

Software Package for Transcription Factor Binding Site (TFBS) Analysis
Papers that mentioned: 33

cran: reshape2

Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421

cran: stringdist

Approximate String Matching, Fuzzy Text Search, and String Distance Functions
Papers that mentioned: 18

pypi: custom

Custom self carry
Papers that mentioned: 1,363

pypi: StarStuff

Essential convenience functions to perform further analysis with star cluster information.
Papers that mentioned: 4