Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1128/AEM.01285-16
https://doi.org/10.1128/AEM.01285-16
Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis
Cited by: 46
Author(s): Sagar M. Utturkar, W. Nathan Cude, Michael S. Robeson, Zamin K. Yang, Dawn M. Klingeman, Miriam Land, S. L. Allman, Tse-Yuan S. Lu, Steven D. Brown, Christopher W. Schadt, Mircea Podar, Mitchel J. Doktycz, Dale A. Pelletier
Published: over 8 years ago
Software Mentions 6
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence AnalysisPapers that mentioned: 240
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascriptPapers that mentioned: 1,819
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.Papers that mentioned: 848