Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1128/AEM.01225-21
https://doi.org/10.1128/AEM.01225-21
Cited by: 7
Author(s): Anna Cäcilia Ingham, Tinna Ravnholt Urth, Raphael N. Sieber, Marc Stegger, Sofie Marie Edslev, Øystein Angen, Anders Rhod Larsen
Published: over 2 years ago
Software Mentions 13
bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing dataPapers that mentioned: 274
bioconductor: ggtree
an R package for visualization of tree and annotation dataPapers that mentioned: 474
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: diagram
Functions for Visualising Simple Graphs (Networks), Plotting Flow DiagramsPapers that mentioned: 20
cran: factoextra
Extract and Visualize the Results of Multivariate Data AnalysesPapers that mentioned: 650
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562