Papers: 10.1128/AEM.01225-21
https://doi.org/10.1128/AEM.01225-21
Dynamics of the Human Nasal Microbiota and Staphylococcus aureus CC398 Carriage in Pig Truck Drivers across One Workweek
Cited by: 7
Author(s): Anna Cäcilia Ingham, Tinna Ravnholt Urth, Raphael N. Sieber, Marc Stegger, Sofie Marie Edslev, Øystein Angen, Anders Rhod Larsen
Published: about 5 years ago
Software Mentions 13
bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing dataPapers that mentioned: 274
Very Likely Science (100)
bioconductor: ggtree
an R package for visualization of tree and annotation dataPapers that mentioned: 474
Very Likely Science (100)
Very Likely Science (100)
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
Very Likely Science (75)
Very Likely Science (83)
cran: diagram
Functions for Visualising Simple Graphs (Networks), Plotting Flow DiagramsPapers that mentioned: 20
Very Likely Science (85)
cran: factoextra
Extract and Visualize the Results of Multivariate Data AnalysesPapers that mentioned: 650
Very Likely Science (85)
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
Very Likely Science (100)
Very Likely Science (100)
Very Likely Science (100)
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562
Very Likely Science (100)
Very Likely Science (65)