Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1126/science.abe3261

https://doi.org/10.1126/science.abe3261

Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events

Cited by: 215
Author(s): Jacob E. Lemieux, Katherine J. Siddle, Bennett Shaw, Christine Loreth, Stephen F. Schaffner, Adrianne Gladden-Young, Gordon Adams, Timelia Fink, Christopher H. Tomkins-Tinch, Lydia A. Krasilnikova, Katherine C. DeRuff, Melissa Rudy, Matthew R. Bauer, Kim A. Lagerborg, Erica Normandin, Sinéad B. Chapman, Steven K. Reilly, Melis N. Anahtar, Aaron E. Lin, Amber Carter, Cameron Myhrvold, Molly Kemball, Sushma Chaluvadi, Caroline Cusick, Katelyn Flowers, Anna Neumann, Felecia Cerrato, Maha Farhat, Damien Slater, Jason B. Harris, John A. Branda, David C. Hooper, Jessie M. Gaeta, Travis P. Baggett, James J. O’Connell, Andreas Gnirke, Tami D. Lieberman, Anthony Philippakis, Meagan Burns, Catherine Brown, Jeremy Luban, Edward T. Ryan, Sarah E Turbett, Regina C. LaRocque, William P. Hanage, Glen R. Gallagher, Lawrence C. Madoff, Sandra Smole, Virginia Pierce, Eric S. Rosenberg, Pardis C. Sabeti, Daniel J. Park, Bronwyn MacInnis
Published: over 3 years ago

Software Mentions 4

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: choroplethr
Simplify the Creation of Choropleth Maps in R
Papers that mentioned: 5
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023