Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1111/mec.15047
https://doi.org/10.1111/mec.15047
Caste‐ and pesticide‐specific effects of neonicotinoid pesticide exposure on gene expression in bumblebees
Cited by: 53
Author(s): Thomas J. Colgan, Isabel Fletcher, Andres N. Arce, Richard J. Gill, Ana Ramos Rodrigues, Eckart Stolle, Lars Chittka, Yannick Wurm
Published: over 5 years ago
Software Mentions 6
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysisPapers that mentioned: 367
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071
pypi: multiqc
Create aggregate bioinformatics analysis reports across many samples and toolsPapers that mentioned: 37