Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1111/jcmm.14918

https://doi.org/10.1111/jcmm.14918

Cited by: 24
Author(s): Yaoyi Xiong, Lushun Yuan, Jing Xiong, Huimin Xu, Yongwen Luo, Gang Wang, Lingao Ju, Yu Xiao, Xinghuan Wang
Published: over 4 years ago

Software Mentions 10

bioconductor: affy

Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

cran: glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607

cran: rmda

Risk Model Decision Analysis
Papers that mentioned: 131

cran: rms

Regression Modeling Strategies
Papers that mentioned: 1,236

cran: survivalROC

Time-Dependent ROC Curve Estimation from Censored Survival Data
Papers that mentioned: 479

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: glmnet

Python wrapper for glmnet
Papers that mentioned: 1,607

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893