Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1099/mgen.0.000484

https://doi.org/10.1099/mgen.0.000484

Genomic diversity of Escherichia coli isolates from backyard chickens and guinea fowl in the Gambia

Cited by: 14
Author(s): Ebenezer Foster-Nyarko, Nabil-Fareed Alikhan, Anuradha Ray, Nicholas M. Thomson, Sheikh Jarju, Brenda Kwambana-Adams, Arss Secka, Justin O’Grady, Martín Antonio, Mark J. Pallen
Published: over 3 years ago

Software Mentions 4

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: phangorn
Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192
pypi: HierCC
Hierarchical Clustering of cgMLST profiles
Papers that mentioned: 15