Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1099/mgen.0.000428

https://doi.org/10.1099/mgen.0.000428

Genomic diversity of Escherichia coli isolates from non-human primates in the Gambia

Cited by: 11
Author(s): Ebenezer Foster-Nyarko, Nabil-Fareed Alikhan, Anuradha Ray, Gaëtan Thilliez, Nicholas M. Thomson, David Baker, Gemma L. Kay, Jennifer Danzy Cramer, Justin O’Grady, Martín Antonio, Mark J. Pallen
Published: about 4 years ago

Software Mentions 3

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
pypi: HierCC
Hierarchical Clustering of cgMLST profiles
Papers that mentioned: 15
pypi: qcat
Qcat is Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files
Papers that mentioned: 34