Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1099/mgen.0.000312

https://doi.org/10.1099/mgen.0.000312

Complete hybrid genome assembly of clinical multidrug-resistant Bacteroides fragilis isolates enables comprehensive identification of antimicrobial-resistance genes and plasmids

Cited by: 13
Author(s): Thomas Vognbjerg Sydenham, Søren Overballe‐Petersen, Henrik Hasman, Hannah M. Wexler, Michael Kemp, Ulrik Stenz Justesen
Published: about 5 years ago

Software Mentions 4

pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
pypi: NanoPlot
Plotting suite for Oxford Nanopore sequencing data and alignments
Papers that mentioned: 90
pypi: rast
Rast
Papers that mentioned: 13
pypi: ugd
Drawing graphs uniformly at random subject to partition constraints (Partition Adjacency Matrix). Used for network testing.
Papers that mentioned: 1