Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1099/mgen.0.000297

https://doi.org/10.1099/mgen.0.000297

Phylogenomic analysis of gastroenteritis-associated Clostridium perfringens in England and Wales over a 7-year period indicates distribution of clonal toxigenic strains in multiple outbreaks and extensive involvement of enterotoxin-encoding (CPE) plasmids

Cited by: 16
Author(s): Raymond Kiu, Shabhonam Caim, Anaïs Painset, Derek Pickard, Craig Swift, Gordon Dougan, Alison E. Mather, Corinne Amar, Lindsay J. Hall
Published: about 5 years ago

Software Mentions 4

cran: rhierbaps
Clustering Genetic Sequence Data Using the HierBAPS Algorithm
Papers that mentioned: 1
pypi: ariba
ARIBA: Antibiotic Resistance Identification By Assembly
Papers that mentioned: 15
pypi: house
A lib to persist blobs by their sha256
Papers that mentioned: 960
pypi: pyani
pyani provides a package and script for calculation of genome-scale average nucleotide identity.
Papers that mentioned: 120