Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/ve/vey033

https://doi.org/10.1093/ve/vey033

Modeling site-specific amino-acid preferences deepens phylogenetic estimates of viral sequence divergence

Cited by: 11
Author(s): Sarah K Hilton, Jesse D. Bloom
Published: over 6 years ago

Software Mentions 4

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggseqlogo
A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
Papers that mentioned: 49
pypi: phydms
Phylogenetic analyses informed by deep mutational scanning data.
Papers that mentioned: 8