Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/giaa158

https://doi.org/10.1093/gigascience/giaa158

ChiRA: an integrated framework for chimeric read analysis from RNA-RNA interactome and RNA structurome data

Cited by: 4
Author(s): Pavankumar Videm, Anup Kumar, Oleg Zharkov, Björn Grüning, Rolf Backofen
Published: over 3 years ago

Software Mentions 4

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

pypi: clan

A command line utility for working with Google Analytics.
Papers that mentioned: 6

pypi: cutadapt

Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562

pypi: pysam

Package for reading, manipulating, and writing genomic data
Papers that mentioned: 130